Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922165.1_cds_XP_016470951.1_63346
CDS Infomation

[gene=LOC107793179] [db_xref=GeneID:107793179] [protein=GATA transcription factor 26-like] [protein_id=XP_016470951.1] [location=complement(join(15879..16189,17192..17312,17430..17616,17715..17818,18121..18193,18718..19150,19711..20076,21948..21987))] [gbkey=CDS]
Sequence

ATGGGAAAGGAAGGACCTTGCTATCACTGTGGTGTTACAAGCACTCCACTTTGGCGTAAT
GGACCGCCTGAAAAGCCAATACTGTGCAACGCATGTGGATCTCGGTGGAGAACAAAAGGG
ACTTTGGCAAACTATACTCCTTTGCATGCAAGGGCAGAACCTTGTGACTTTGAGGAACAC
CGAGTTTCGAGGTTCAAAAACATGCCCATGAAGAACAAAGAGGCAAAGGTTCTGAAACGA
AAACAAAGTCATGATATGGTTGAAGTTGGAAGTCCTCCTGATTATAATTTTGGTTTCCGA
AAGTGTTTAGATGAAGATACTAGCAACAGGTCGAGTTCTGGTTCCGTTGTCTCAAACTCC
GAGAGCTGTGCACAATTTGGTAGTGCTGAAGCAAGTGATTTGACGGGCCCGGCGCAATCC
AATATATGGGATACAACGGTGCCGTCAAAGAAGAGAACCTGTTTCAATCGGCCAAAGCCA
TCTTCAGTCGAGAAGCTCACCAAAGACCTATATACCATCTTACATGAACAACAGCAAAGT
TCATGCTTCTCTGCATCCTCTGAAGATGATTTGCTTTTCGAGAGTGAAAAGCCGATGGTT
TCGGTTGAGATAGGACATGGGAGTATGCTAATTCGGCATCCTAGTTCGATAGGTAGAGAA
GAAGAATCAGAAGCCAGCTCTCTTTCTGTTGACAACAAGCACCGTTCTGTCAATGAGGCT
TATTCACGATTGACTACCCGACCTGTAAATATTATTAAGGGTGTCAATTCACCTAATATG
GGTGCCGACAGAACCAAGAAACCTATTGGTCAGGCTGTGGAACAAGACCAGATTAAAAGA
AACAAAGAGAAACTTGAAACACTACAGATTCTTGGACATCATAATTCACCCCTTCGCTAT
ATAGAACTGAAGGATGTACTTAATTATGAAGAATTCATGAGGCATTTATCAAGTGATGAA
CAACAACAGCTACTAAAGTACTTACCGCCTGTTGATTCTTTTGCGCCTCCAGATAGTCTT
AGAAGCATGTTCGAGAGCTCTCAATTTGAGGAAAACGTCTCTTCCTTCCAGAAACTTCTT
GCAGAAGGTGTTTTCGATAACTCATTGCCAGGAGTAAAATTAGAAGATTGTAGAACATTG
AAGAGGTTTATATTATGCTATTTATCAAAGTCAAAGTGGGTGGAACAATATAATCTACTC
AAGGACACAAAATGTAAGAATAGTAGCAGCGGTTCTGAAGTTGCAGGAGAGCAAAGTGTT
GTCGGCACATGTCATTCAGTGAATGCGAAGAGACCACGGGAGGGGCCACATCTAAAGTAT
TCGGGTGCAAAGACAACAATGAAGAGCCCCAAGAGTGCGGTGATGAAAAGCATCTATGAG
CAGAAGGAACTATTAGACAATGATGGTTCTTACTCCAGCCCAAAAAGCTCGTTCGCCTTG
CCTTCTGAGACTAGTTCCCTCGTACTGGATTCTTTCCGTTCTGCAAACGAAAATTCTGAT
CAGGACTTGCTGCTGAATGTGCCATCCAACAGCTACTTCCCTCAAGCAGAACTACTCTTA
CCAACATCAAGTTTTACTCCTCAAGCGAGTGCTAGTAGTAGCTCAATGTATCCTTCACAT
CTCGTCCGTCCCTAG

Peptide Sequence

PEP ID

XP_016470951.1
PEP Infomation

PREDICTED: GATA transcription factor 26-like [Nicotiana tabacum]
Sequence

MGKEGPCYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLANYTPLHARAEPCDFEEH
RVSRFKNMPMKNKEAKVLKRKQSHDMVEVGSPPDYNFGFRKCLDEDTSNRSSSGSVVSNS
ESCAQFGSAEASDLTGPAQSNIWDTTVPSKKRTCFNRPKPSSVEKLTKDLYTILHEQQQS
SCFSASSEDDLLFESEKPMVSVEIGHGSMLIRHPSSIGREEESEASSLSVDNKHRSVNEA
YSRLTTRPVNIIKGVNSPNMGADRTKKPIGQAVEQDQIKRNKEKLETLQILGHHNSPLRY
IELKDVLNYEEFMRHLSSDEQQQLLKYLPPVDSFAPPDSLRSMFESSQFEENVSSFQKLL
AEGVFDNSLPGVKLEDCRTLKRFILCYLSKSKWVEQYNLLKDTKCKNSSSGSEVAGEQSV
VGTCHSVNAKRPREGPHLKYSGAKTTMKSPKSAVMKSIYEQKELLDNDGSYSSPKSSFAL
PSETSSLVLDSFRSANENSDQDLLLNVPSNSYFPQAELLLPTSSFTPQASASSSSMYPSH
LVRP

Transcript Sequence

Gene sequence data has not been registered.